This web page is being kept alive for historical purposes only. If you originally registered with a username please use that to sign in. Most users should sign in with their email address. Thank you for rating the program! Trachtenberg Speed Math Science Tools. A software package for modelling the dynamics, steady states and control of biochemical and other systems.
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Notify me of replies from other users. Most users should sign in with their email address. You could not be signed in. It simulates the kinetics of systems of biochemical reactions and provides a number of tools to fit models to data, optimize any function of the model, perform metabolic control analysis and linear stability analysis.
Oxford University Press is a department of the University of Oxford. Although GEPASI was written with biochemical pathways in mind, it can equally be used to simulate other dynamical systems.
This free software was originally created by Pedro Mendes. Comments on Gepasi You can also add comment via Facebook. For any system of up to 45 metabolites and 45 reactions, each with any user-defined or one of 35 predefined rate equations, one can produce trajectories of the metabolite concentrations and obtain a steady state if it does exist. Gepasi simplifies the task of model building by assisting the user in translating the gepxsi of chemistry reactions to mathematics matrices and differential equations in a transparent way.
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The results of simulations can be plotted in 2D and 3D directly from the program Gepasi uses the excellent Gnuplot package. Who’s talking about Gepasi? This is combined with a set of sophisticated egpasi algorithms that assure the results are obtained fast and accurate.
You do not currently have access to this article. Gepasi ‘s scan utility provides a way for advanced exploration of a model’s behaviour in multi-dimensional parameter space Gepasi is capable of doing data fitting parameter estimation with experimental data. Gepasi is capable of finding maxima or minima of any model variables with any number of adjustable model parameters.
Gepasi is intended primarily for research purposes but because of its user-friendly interface it is equally good softwade education.
You may want to check out more software, such as f x -ViewerTrachtenberg Speed Math or MathMaticwhich might be related to Gepasi. Purchase Subscription prices and ordering Short-term Access To purchase short term access, please sign in to your Oxford Academic account above.
This web page is being kept alive for historical purposes only.
The latest installation package that can be downloaded is 3 MB in size. Models in Gepasi v. Thank you for rating the program!
Gepasi (free) download Windows version
Our software library provides a free download of Gepasi 3. Simulations can be followed interactively including adding perturbations to a time course Gepasi characterises steady states using Metabolic Control Analysis and linear stability analysis. Gepasi has not been updated since Gepasi simplifies the task of model building by assisting the user in translating the language of chemistry reactions to mathematics matrices and differential equations in a transparent way.
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To purchase short term access, please sign in to your Oxford Academic account above. Gepasi is an old software package for modeling biochemical systems in Microsoft Windows. A description of the program was published in the journal Cabios: